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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THCA cis rs2076028 1 rs5757208 chr22:39049230 JOSD1 chr22:39081549-39096459:- -0.15 -3.94 9.33E-5 Resting heart rate
THCA cis rs2076028 1 rs5757208 chr22:39049230 TOMM22 chr22:39077954-39080763:+ -0.16 -3.58 0.000379 Resting heart rate
THCA cis rs2076028 1 rs5757211 chr22:39051705 JOSD1 chr22:39081549-39096459:- -0.15 -3.94 9.33E-5 Resting heart rate
THCA cis rs2076028 1 rs5757211 chr22:39051705 TOMM22 chr22:39077954-39080763:+ -0.16 -3.58 0.000379 Resting heart rate
THCA cis rs2076028 1 rs5757213 chr22:39053888 JOSD1 chr22:39081549-39096459:- -0.15 -3.94 9.33E-5 Resting heart rate
THCA cis rs2076028 1 rs5757213 chr22:39053888 TOMM22 chr22:39077954-39080763:+ -0.16 -3.58 0.000379 Resting heart rate
THCA cis rs2076028 1 rs5757226 chr22:39070550 JOSD1 chr22:39081549-39096459:- -0.15 -3.86 0.000127 Resting heart rate
THCA cis rs2076028 1 rs5757226 chr22:39070550 LOC646851 chr22:38974125-39052634:- 0.13 3.43 0.000646 Resting heart rate
THCA cis rs2076028 1 rs5757226 chr22:39070550 TOMM22 chr22:39077954-39080763:+ -0.16 -3.49 0.000525 Resting heart rate
THCA cis rs2076028 1 rs5757231 chr22:39071658 JOSD1 chr22:39081549-39096459:- 0.16 4.3 2.09E-5 Resting heart rate
THCA cis rs2076028 1 rs5757231 chr22:39071658 TOMM22 chr22:39077954-39080763:+ 0.18 3.97 8.3E-5 Resting heart rate
THCA cis rs2076028 1 rs5757232 chr22:39071677 JOSD1 chr22:39081549-39096459:- -0.15 -3.89 0.000115 Resting heart rate
THCA cis rs2076028 1 rs5757232 chr22:39071677 LOC646851 chr22:38974125-39052634:- 0.13 3.4 0.000739 Resting heart rate
THCA cis rs2076028 1 rs5757232 chr22:39071677 TOMM22 chr22:39077954-39080763:+ -0.16 -3.55 0.000423 Resting heart rate
THCA cis rs2076028 1 rs5757234 chr22:39072686 LOC646851 chr22:38974125-39052634:- 0.14 3.67 0.00027 Resting heart rate